25. Srivastava M, Singh H, Naik PK* (2009) Quantitative structure-activity relationship (QSAR) of artemisinin: development of predictive in vitro antimalarial activity models. Journal of Chemometrics, 23(11-12): 618-635. DOI:10.1002/cem.1261 [ISSN: 0886-9383]FULL TEXT
24. Naik PK*, Sindhura, Singh T, Singh H (2009) Quantitative structure-activity relationship (QSAR) for insecticides: development of predictive in vivo insecticide activity models. SAR and QSAR in Environmental Research, 20(5-6): 551-566. DOI: 10.1080/10629360903278735 [ISSN: 1062-936X]FULL TEXT
23. Patel AK, Patel S, Naik PK (2009) Binary classification of uncharacterized proteins into DNA binding/non-DNA binding proteins from sequence derived features using ANN. Digest Journal of Nanomaterials and Biostructures, 4(4): 775-782. [ISSN: 1842-3582]FULL TEXT
22. Jain S, Naik PK*, Sharma R (2009) A computational model for cell survival/death using VHDL and MATLAB simulator. Digest Journal of Nanomaterials and Biostructures, 4(4): 863-879. [ISSN: 1842-3582, IF: 1.092]FULL TEXT
21. Jain S, Naik PK*, Sharma R (2009) A computational modeling of apoptosis signaling using VHDL and MATLAB simulator. International J. of Information and Communication Technology, 2(1-2):7-12. [ISSN: 1466-6642]Full Text
20. Bijarnia, R. K., Kaur, T., Naik, P. K., Singla, S. K., & Tandon, C. (2008). In silico study on interaction of active binding sites of proteins with calcium oxalate monohydrate. Office of James Bumett, 2, 92-107.Full Text
19. Alam MA, Naik PK*, Gulati P, Gulati AK, Mishra GP (2008) Characterization of genetic structure of Podophyllum hexandrum populations–an endangered medicinal herb of Northwestern Himalaya using ISSR-PCR markers and its relatedness with podophyllotoxin content. African Journal of Biotechnology, 7(8): 1028-1040. [ISSN: 1684-5315]Full Text
18. Gupta S, Srivastava M, Mishra GP, Naik PK*, Chauhan RS, Tiwari KS, Kumar M, Singh R (2008) Analogy of ISSR and RAPD markers for comparative analysis of genetic diversity among different Jatropha curcas genotypes. African Journal of Biotechnology, 7(23): 4230-4243. [ISSN: 1684-5315]Full Text
17. Naik PK*, Mittal VK, Gupta S (2008) RetroPred: a tool for prediction, classification and extraction of non-LTR retrotransposons (LINEs & SINEs) from the genome by integrating PALS, PILER, MEME and ANN. Bioinformation, 2(6): 263-270. DOI:10.6026/97320630002263 [ISSN: 0973-2063]Full Text
16. Jaiswal K, Naik PK* (2008) Distinguishing compounds with anticancer activity by ANN using inductive QSAR descriptors. Bioinformation, 2(10):441-451. doi: 10.6026/97320630002441 [ISSN: 0973-2063]FULL TEXT
15. Sengupta D, Verma D, Naik PK* (2008) Docking-MM-GB/SA and ADME screening of HIV-1 NNRTI inhibitor: nevirapine and its analogues. In Silico Biology, 8(3-4): 275-289. [ISSN: 1386-6338]Full Text
14. Sengupta D, Verma D, Naik PK* (2007) Docking mode of delvardine and its analogues into P66 domain of HIV-1 reverse transcriptase: screening using MM-GB/SA and ADME properties. Journal of Biosciences, 32(7): 1307-1316. doi: 10.1007/s12038-007-0140-y. [ISSN: 0250-5991]Full Text
13. Sengupta, D., Naik PK* (2007). Binding Modes, binding Affinities and ADME Screening of HIV-1 NNRTI Inhibitor: Efavirnez and its analogues. Online Journal of Bioinformatics, 8(1), 99-114.Full Text
12. Tandon, C., Aggarwal, A., Goel, P., Sengupta, D., & Naik, P. K. (2007). In-silico TAT-PTD prediction for cell penetrating peptides. Online Journal of Bioinformatics, 8(1), 115-138.Full Text
11. Tandon C, De Lisle RC, Boulatnikov I, Naik PK (2007) Interaction of carboxyl-terminal peptides of cytosolic-tail of apactin with PDZ domains of NHERF/EBP50 and PDZK-1/CAP70. Molecular and Cellular Biochemistry, 302: 157-167. DOI: 10.1007/s11010-007-9437-2 [ISSN: 0300-8177]Full Text
10. Naik PK*, Mishra VS, Gupta M, Jaiswal K (2007) Prediction of enzymes and non-enzymes from protein sequence based on sequence derived features and PSSM matrix using artificial neural network. Bioinformation, 2(3): 107-112. DOI: 10.6026/97320630002107 [ISSN: 0973-2063]Full Text
9. D. Sengupta, D. Verma, V.S. Mishra, P.K. Naik (2007) Clustering of HIV-I Subtype: Study of Molecular Diversity using Phylogenetic Analysis. Bioinformatics Trends: A Journal of Bioinformatics and its Applications.Full Text
8. Nayak S, Naik PK, Acharya LK, Pattnaik AK (2006) Detection and evaluation of genetic variation in 17 promising cultivars of turmeric (Curcuma longa L.) using 4C nuclear DNA content and RAPD markers. Cytologia, 71(1): 49-55. DOI: 10.1508/cytologia.71.49 [ISSN: 0011-4545]Full Text
Articles Published
25. Srivastava M, Singh H, Naik PK* (2009) Quantitative structure-activity relationship (QSAR) of artemisinin: development of predictive in vitro antimalarial activity models. Journal of Chemometrics, 23(11-12): 618-635. DOI:10.1002/cem.1261 [ISSN: 0886-9383]FULL TEXT
24. Naik PK*, Sindhura, Singh T, Singh H (2009) Quantitative structure-activity relationship (QSAR) for insecticides: development of predictive in vivo insecticide activity models. SAR and QSAR in Environmental Research, 20(5-6): 551-566. DOI: 10.1080/10629360903278735 [ISSN: 1062-936X]FULL TEXT
23. Patel AK, Patel S, Naik PK (2009) Binary classification of uncharacterized proteins into DNA binding/non-DNA binding proteins from sequence derived features using ANN. Digest Journal of Nanomaterials and Biostructures, 4(4): 775-782. [ISSN: 1842-3582]FULL TEXT
22. Jain S, Naik PK*, Sharma R (2009) A computational model for cell survival/death using VHDL and MATLAB simulator. Digest Journal of Nanomaterials and Biostructures, 4(4): 863-879. [ISSN: 1842-3582, IF: 1.092]FULL TEXT
21. Jain S, Naik PK*, Sharma R (2009) A computational modeling of apoptosis signaling using VHDL and MATLAB simulator. International J. of Information and Communication Technology, 2(1-2):7-12. [ISSN: 1466-6642]Full Text
20. Bijarnia, R. K., Kaur, T., Naik, P. K., Singla, S. K., & Tandon, C. (2008). In silico study on interaction of active binding sites of proteins with calcium oxalate monohydrate. Office of James Bumett, 2, 92-107.Full Text
19. Alam MA, Naik PK*, Gulati P, Gulati AK, Mishra GP (2008) Characterization of genetic structure of Podophyllum hexandrum populations–an endangered medicinal herb of Northwestern Himalaya using ISSR-PCR markers and its relatedness with podophyllotoxin content. African Journal of Biotechnology, 7(8): 1028-1040. [ISSN: 1684-5315]Full Text
18. Gupta S, Srivastava M, Mishra GP, Naik PK*, Chauhan RS, Tiwari KS, Kumar M, Singh R (2008) Analogy of ISSR and RAPD markers for comparative analysis of genetic diversity among different Jatropha curcas genotypes. African Journal of Biotechnology, 7(23): 4230-4243. [ISSN: 1684-5315]Full Text
17. Naik PK*, Mittal VK, Gupta S (2008) RetroPred: a tool for prediction, classification and extraction of non-LTR retrotransposons (LINEs & SINEs) from the genome by integrating PALS, PILER, MEME and ANN. Bioinformation, 2(6): 263-270. DOI:10.6026/97320630002263 [ISSN: 0973-2063]Full Text
16. Jaiswal K, Naik PK* (2008) Distinguishing compounds with anticancer activity by ANN using inductive QSAR descriptors. Bioinformation, 2(10):441-451. doi: 10.6026/97320630002441 [ISSN: 0973-2063]FULL TEXT
15. Sengupta D, Verma D, Naik PK* (2008) Docking-MM-GB/SA and ADME screening of HIV-1 NNRTI inhibitor: nevirapine and its analogues. In Silico Biology, 8(3-4): 275-289. [ISSN: 1386-6338]Full Text
14. Sengupta D, Verma D, Naik PK* (2007) Docking mode of delvardine and its analogues into P66 domain of HIV-1 reverse transcriptase: screening using MM-GB/SA and ADME properties. Journal of Biosciences, 32(7): 1307-1316. doi: 10.1007/s12038-007-0140-y. [ISSN: 0250-5991]Full Text
13. Sengupta, D., Naik PK* (2007). Binding Modes, binding Affinities and ADME Screening of HIV-1 NNRTI Inhibitor: Efavirnez and its analogues. Online Journal of Bioinformatics, 8(1), 99-114.Full Text
12. Tandon, C., Aggarwal, A., Goel, P., Sengupta, D., & Naik, P. K. (2007). In-silico TAT-PTD prediction for cell penetrating peptides. Online Journal of Bioinformatics, 8(1), 115-138.Full Text
11. Tandon C, De Lisle RC, Boulatnikov I, Naik PK (2007) Interaction of carboxyl-terminal peptides of cytosolic-tail of apactin with PDZ domains of NHERF/EBP50 and PDZK-1/CAP70. Molecular and Cellular Biochemistry, 302: 157-167. DOI: 10.1007/s11010-007-9437-2 [ISSN: 0300-8177]Full Text
10. Naik PK*, Mishra VS, Gupta M, Jaiswal K (2007) Prediction of enzymes and non-enzymes from protein sequence based on sequence derived features and PSSM matrix using artificial neural network. Bioinformation, 2(3): 107-112. DOI: 10.6026/97320630002107 [ISSN: 0973-2063]Full Text
9. D. Sengupta, D. Verma, V.S. Mishra, P.K. Naik (2007) Clustering of HIV-I Subtype: Study of Molecular Diversity using Phylogenetic Analysis. Bioinformatics Trends: A Journal of Bioinformatics and its Applications.Full Text
8. Nayak S, Naik PK, Acharya LK, Pattnaik AK (2006) Detection and evaluation of genetic variation in 17 promising cultivars of turmeric (Curcuma longa L.) using 4C nuclear DNA content and RAPD markers. Cytologia, 71(1): 49-55. DOI: 10.1508/cytologia.71.49 [ISSN: 0011-4545]Full Text